Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_22525 | Not Available | Negative | 4839348 - 4840280 | 32265.3 |
| cysteine methyltransferase | RT97_22530 | Not Available | Negative | 4840408 - 4840905 | 17650.0 |
| ada | RT97_22535 | Not Available | Negative | 4840912 - 4842522 | 57079.3 |
| phosphoglucomutase | RT97_22540 | Not Available | Positive | 4842633 - 4844015 | 48661.6 |
| 3-deoxy-d-manno-octulosonic acid transferase | RT97_22545 | Not Available | Positive | 4844021 - 4845415 | 49681.8 |
| hypothetical protein | RT97_22550 | Not Available | Negative | 4846590 - 4847156 | 20303.7 |
| channel protein tolc | RT97_22555 | Not Available | Negative | 4848569 - 4850110 | 53878.0 |
| sulfurtransferase | RT97_22560 | Not Available | Negative | 4850306 - 4850641 | 11950.1 |
| protein-l-isoaspartate o-methyltransferase | RT97_22565 | Not Available | Negative | 4850656 - 4851333 | 24817.0 |
| tetr family transcriptional regulator | RT97_22570 | Not Available | Negative | 4851426 - 4852103 | 25350.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
