Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter substrate-binding protein | RT97_22470 | Not Available | Negative | 4826483 - 4827385 | 32107.6 |
| mfs transporter | RT97_22475 | Not Available | Positive | 4827571 - 4828890 | 47432.7 |
| 2-hydroxy-acid oxidase | RT97_22480 | Not Available | Positive | 4828955 - 4830400 | 51254.7 |
| tannase | RT97_22485 | Not Available | Positive | 4830404 - 4832038 | 56792.9 |
| lysr family transcriptional regulator | RT97_22490 | Not Available | Positive | 4832128 - 4833093 | 34576.8 |
| oxidoreductase | RT97_22500 | Not Available | Positive | 4833997 - 4834800 | 26654.3 |
| saccharopine dehydrogenase | RT97_22505 | Not Available | Positive | 4834826 - 4835962 | 40541.7 |
| amp-dependent acyl-coa synthetase | RT97_22510 | Not Available | Positive | 4835968 - 4837509 | 55476.6 |
| hypothetical protein | RT97_22515 | Not Available | Negative | 4837543 - 4838382 | 29640.8 |
| membrane protein | RT97_22520 | Not Available | Positive | 4838585 - 4839241 | 24110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
