Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore biosynthesis protein | RT97_22415 | Not Available | Negative | 4811712 - 4812767 | 39388.1 |
| hypothetical protein | RT97_22425 | Not Available | Negative | 4813835 - 4814644 | 29682.6 |
| cyclic peptide transporter | RT97_22430 | Not Available | Positive | 4814919 - 4816598 | 61134.8 |
| ornithine monooxygenase | RT97_22435 | Not Available | Positive | 4816704 - 4818005 | 48445.4 |
| hemolysin secretion protein d | RT97_22440 | Not Available | Positive | 4818108 - 4819271 | 40920.9 |
| macrolide abc transporter atp-binding protein | RT97_22445 | Not Available | Positive | 4819289 - 4821274 | 69879.7 |
| transporter | RT97_22450 | Not Available | Positive | 4821310 - 4822737 | 49785.1 |
| hypothetical protein | RT97_22455 | Not Available | Positive | 4822876 - 4823115 | 8553.13 |
| peptidase s45 | RT97_22460 | Not Available | Positive | 4823336 - 4825699 | 85166.5 |
| glutathione s-transferase | RT97_22465 | Not Available | Negative | 4825716 - 4826420 | 26172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
