Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_22265 | Not Available | Negative | 4780639 - 4781625 | 35507.8 |
| creatinine amidohydrolase | RT97_22270 | Not Available | Negative | 4781694 - 4782557 | 31426.7 |
| amidohydrolase | RT97_22275 | Not Available | Negative | 4782577 - 4783848 | 45985.1 |
| nad(p)h dehydrogenase | RT97_22280 | Not Available | Negative | 4783845 - 4784432 | 22557.4 |
| cdar family transcriptional regulator | RT97_22285 | Not Available | Negative | 4784557 - 4786569 | 72221.6 |
| 3-ketoacyl-acp reductase | RT97_22290 | Not Available | Positive | 4786764 - 4787555 | 27613.3 |
| amino acid-binding protein | RT97_22295 | Not Available | Positive | 4787659 - 4788870 | 42477.6 |
| abc transporter permease | RT97_22300 | Not Available | Positive | 4788956 - 4789897 | 32926.7 |
| branched-chain amino acid abc transporter permease | RT97_22305 | Not Available | Positive | 4789902 - 4791146 | 43369.4 |
| branched-chain amino acid abc transporter substrate-binding protein | RT97_22310 | Not Available | Positive | 4791143 - 4791898 | 27651.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
