Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine 4-monooxygenase | RT97_22215 | Not Available | Negative | 4770591 - 4771463 | 32572.6 |
| arti protein | RT97_22220 | Not Available | Negative | 4771484 - 4772284 | 28786.4 |
| 4-hydroxyphenylpyruvate dioxygenase | RT97_22225 | Not Available | Negative | 4772323 - 4773450 | 41608.6 |
| asnc family transcriptional regulator | RT97_22230 | Not Available | Positive | 4773598 - 4774071 | 17754.6 |
| gcn5 family acetyltransferase | RT97_22235 | Not Available | Positive | 4774181 - 4774909 | 26683.1 |
| magnesium transporter | RT97_22240 | Not Available | Positive | 4775010 - 4775888 | 32189.3 |
| acyltransferase | RT97_22245 | Not Available | Positive | 4775888 - 4777459 | 56153.4 |
| fad-binding protein | RT97_22250 | Not Available | Negative | 4777466 - 4778830 | 49406.9 |
| abc transporter atp-binding protein | RT97_22255 | Not Available | Negative | 4778854 - 4779657 | 29058.8 |
| nitrate abc transporter atpase | RT97_22260 | Not Available | Negative | 4779654 - 4780484 | 30517.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
