Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_22165 | Not Available | Positive | 4758380 - 4759171 | 30566.3 |
| mfs transporter | RT97_22170 | Not Available | Negative | 4759199 - 4760464 | 44493.6 |
| malate synthase | RT97_22175 | Not Available | Negative | 4760595 - 4762769 | 77612.0 |
| aspartate aminotransferase | RT97_22180 | Not Available | Positive | 4763013 - 4763990 | 34571.3 |
| abc transporter substrate-binding protein | RT97_22185 | Not Available | Positive | 4764052 - 4765020 | 33477.5 |
| iclr family transcriptional regulator | RT97_22190 | Not Available | Negative | 4765164 - 4765904 | 26546.8 |
| 3-hydroxy-3-methylglutaryl-coa lyase | RT97_22195 | Not Available | Positive | 4766025 - 4766960 | 32564.5 |
| hypothetical protein | RT97_22200 | Not Available | Positive | 4766953 - 4767721 | 27625.6 |
| beta-lactamase | RT97_22205 | Not Available | Negative | 4767854 - 4768786 | 33933.3 |
| long-chain fatty acid--coa ligase | RT97_22210 | Not Available | Negative | 4768787 - 4770478 | 61466.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
