Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | RT97_22110 | Not Available | Negative | 4748369 - 4749136 | 28926.9 |
| abc transporter substrate-binding protein | RT97_22115 | Not Available | Negative | 4749206 - 4750348 | 39454.7 |
| major facilitator transporter | RT97_22120 | Not Available | Negative | 4750419 - 4751930 | 52983.2 |
| dna polymerase iii subunit gamma/tau | RT97_22125 | Not Available | Positive | 4752062 - 4753408 | 49164.6 |
| hypothetical protein | RT97_22130 | Not Available | Negative | 4753399 - 4753626 | 7989.62 |
| 6-phosphofructokinase | RT97_22135 | Not Available | Negative | 4753623 - 4754879 | 45202.9 |
| hypothetical protein | RT97_22145 | Not Available | Negative | 4755779 - 4756102 | 11573.9 |
| lysr family transcriptional regulator | RT97_22150 | Not Available | Positive | 4756185 - 4757120 | 33832.7 |
| fasciclin | RT97_22155 | Not Available | Negative | 4757157 - 4757735 | 18983.3 |
| hypothetical protein | RT97_22160 | Not Available | Positive | 4758160 - 4758387 | 8313.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
