Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | RT97_02150 | Not Available | Positive | 466141 - 466887 | 25674.1 |
| deaminase/reductase | RT97_02160 | Not Available | Negative | 467213 - 467854 | 22915.5 |
| hypothetical protein | RT97_02165 | Not Available | Positive | 468095 - 468385 | 10148.1 |
| hypothetical protein | RT97_02170 | Not Available | Negative | 468471 - 469169 | 25001.5 |
| hypothetical protein | RT97_02175 | Not Available | Negative | 469291 - 469644 | 13333.6 |
| membrane protein | RT97_02180 | Not Available | Negative | 469737 - 470324 | 21662.0 |
| hypothetical protein | RT97_02185 | Not Available | Positive | 470571 - 470975 | 14738.7 |
| hypothetical protein | RT97_02195 | Not Available | Negative | 471578 - 471871 | 11117.4 |
| hypothetical protein | RT97_02200 | Not Available | Positive | 472100 - 472735 | 23022.0 |
| hypothetical protein | RT97_02205 | Not Available | Positive | 472813 - 473043 | 8489.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
