Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | RT97_22060 | Not Available | Negative | 4735500 - 4736255 | 27872.6 |
| polysaccharide deacetylase | RT97_22065 | Not Available | Negative | 4736304 - 4737227 | 34554.1 |
| membrane protein | RT97_22070 | Not Available | Negative | 4737238 - 4737669 | 15766.7 |
| ethanolamine utilization protein eutn | RT97_22075 | Not Available | Positive | 4737902 - 4739107 | 42094.8 |
| abc transporter permease | RT97_22080 | Not Available | Positive | 4739130 - 4740005 | 30267.3 |
| abc transporter | RT97_22085 | Not Available | Positive | 4740029 - 4742524 | 85412.1 |
| membrane protein | RT97_22090 | Not Available | Positive | 4742576 - 4743841 | 42995.5 |
| glutathione synthetase | RT97_22095 | Not Available | Positive | 4743838 - 4744791 | 34945.4 |
| peptidase | RT97_22100 | Not Available | Negative | 4744754 - 4746055 | 48569.0 |
| tonb-dependent receptor | RT97_22105 | Not Available | Negative | 4746055 - 4748256 | 78710.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
