Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | RT97_21960 | Not Available | Negative | 4707794 - 4708444 | 22699.2 |
| abc transporter substrate-binding protein | RT97_21965 | Not Available | Negative | 4708629 - 4709540 | 32997.8 |
| hypothetical protein | RT97_21970 | Not Available | Negative | 4709591 - 4710925 | 47096.5 |
| dna-binding protein | RT97_21975 | Not Available | Positive | 4711063 - 4711926 | 30901.0 |
| spw repeat protein | RT97_21980 | Not Available | Positive | 4712011 - 4712376 | 13020.2 |
| rnd transporter | RT97_21985 | Not Available | Negative | 4712480 - 4713979 | 52409.4 |
| nodulation protein | RT97_21990 | Not Available | Negative | 4713990 - 4717262 | 115472.0 |
| glycogen branching protein | RT97_21995 | Not Available | Negative | 4717467 - 4719641 | 81210.0 |
| alpha-glucosidase | RT97_22000 | Not Available | Negative | 4719647 - 4721341 | 62718.6 |
| fad-dependent oxidoreductase | RT97_22005 | Not Available | Positive | 4721473 - 4722924 | 52662.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
