Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | RT97_21910 | Not Available | Positive | 4696503 - 4696904 | 15069.9 |
| alpha/beta hydrolase | RT97_21915 | Not Available | Positive | 4696925 - 4697737 | 29977.2 |
| molybdenum cofactor biosysynthesis protein | RT97_21920 | Not Available | Negative | 4697720 - 4698247 | 18526.7 |
| luxr family transcriptional regulator | RT97_21925 | Not Available | Positive | 4698652 - 4699359 | 25537.9 |
| histidine kinase | RT97_21930 | Not Available | Positive | 4699781 - 4701601 | 66111.1 |
| cytochrome p450 | RT97_21935 | Not Available | Negative | 4701609 - 4703963 | 86909.4 |
| abc transporter substrate-binding protein | RT97_21940 | Not Available | Negative | 4703983 - 4704951 | 33544.9 |
| iclr family transcriptional regulator | RT97_21945 | Not Available | Positive | 4705082 - 4705924 | 29510.5 |
| udp pyrophosphate phosphatase | RT97_21950 | Not Available | Negative | 4705947 - 4706774 | 29722.3 |
| hypothetical protein | RT97_21955 | Not Available | Positive | 4706930 - 4707802 | 31820.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
