Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_21805 | Not Available | Positive | 4676389 - 4676703 | 11411.8 |
| acyl-coa dehydrogenase | RT97_21810 | Not Available | Negative | 4676743 - 4678002 | 45809.2 |
| alanine racemase | RT97_21815 | Not Available | Negative | 4678103 - 4679245 | 39657.8 |
| hypothetical protein | RT97_21825 | Not Available | Positive | 4679933 - 4680205 | 9677.08 |
| sugar abc transporter atp-binding protein | RT97_21830 | Not Available | Negative | 4680231 - 4681298 | 38576.7 |
| abc transporter permease | RT97_21835 | Not Available | Negative | 4681342 - 4682226 | 32347.8 |
| abc transporter permease | RT97_21840 | Not Available | Negative | 4682249 - 4683157 | 33543.6 |
| abc transporter substrate-binding protein | RT97_21845 | Not Available | Negative | 4683169 - 4684530 | 48955.1 |
| taurine dioxygenase | RT97_21850 | Not Available | Negative | 4684544 - 4685503 | 35348.4 |
| nitrilotriacetate monooxygenase | RT97_21855 | Not Available | Positive | 4685783 - 4687141 | 50114.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
