Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_21755 | Not Available | Positive | 4665148 - 4667541 | 88333.7 |
| 4-oxalocrotonate tautomerase | RT97_21760 | Not Available | Negative | 4667563 - 4667943 | 14327.2 |
| dna-binding protein | RT97_21765 | Not Available | Negative | 4667999 - 4668670 | 24445.7 |
| hypothetical protein | RT97_21770 | Not Available | Positive | 4668943 - 4669875 | 32158.2 |
| signal peptide protein | RT97_21775 | Not Available | Positive | 4669914 - 4670816 | 33554.7 |
| coa-transferase | RT97_21780 | Not Available | Negative | 4670829 - 4671704 | 30586.9 |
| short-chain dehydrogenase | RT97_21785 | Not Available | Positive | 4671852 - 4672754 | 32643.9 |
| hypothetical protein | RT97_21790 | Not Available | Negative | 4672888 - 4673286 | 14493.2 |
| tat pathway signal protein | RT97_21795 | Not Available | Negative | 4673308 - 4675173 | 66489.0 |
| enoyl-coa hydratase | RT97_21800 | Not Available | Positive | 4675273 - 4676100 | 29053.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
