Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | RT97_21705 | Not Available | Negative | 4656546 - 4657514 | 34858.5 |
| chromate transporter | RT97_21710 | Not Available | Negative | 4657552 - 4658151 | 21401.6 |
| chromate transporter | RT97_21715 | Not Available | Negative | 4658210 - 4658812 | 21256.8 |
| membrane protein | RT97_21720 | Not Available | Positive | 4658900 - 4659823 | 32866.6 |
| hypothetical protein | RT97_21725 | Not Available | Negative | 4659833 - 4660384 | 20506.2 |
| hypothetical protein | RT97_21730 | Not Available | Positive | 4660501 - 4660950 | 15079.2 |
| membrane protein | RT97_21735 | Not Available | Positive | 4661025 - 4662242 | 44465.7 |
| acetoacetate decarboxylase | RT97_21740 | Not Available | Positive | 4662314 - 4663063 | 27558.5 |
| 3-hydroxybutyrate dehydrogenase | RT97_21745 | Not Available | Positive | 4663122 - 4663904 | 27507.3 |
| marr family transcriptional regulator | RT97_21750 | Not Available | Negative | 4664051 - 4665007 | 35124.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
