Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | RT97_21655 | Not Available | Negative | 4649538 - 4650203 | 23138.9 |
| abc transporter | RT97_21660 | Not Available | Positive | 4650219 - 4650941 | 25643.9 |
| ribosomal protein l7/l12 | RT97_21665 | Not Available | Positive | 4650987 - 4651490 | 17443.9 |
| hypothetical protein | RT97_21670 | Not Available | Positive | 4651495 - 4652475 | 36349.5 |
| 23s rrna methyltransferase | RT97_21675 | Not Available | Positive | 4652550 - 4653296 | 26215.7 |
| fad-dependent oxidoreductase | RT97_21680 | Not Available | Negative | 4653304 - 4654419 | 40362.1 |
| lysr family transcriptional regulator | RT97_21685 | Not Available | Negative | 4654619 - 4654789 | 5747.27 |
| transcriptional regulator | RT97_21690 | Not Available | Negative | 4654892 - 4655482 | 21371.8 |
| acetyltransferase | RT97_21695 | Not Available | Positive | 4655525 - 4656046 | 18763.5 |
| hypothetical protein | RT97_21700 | Not Available | Negative | 4656050 - 4656532 | 17522.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
