Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa-phosphatase | RT97_02100 | Not Available | Positive | 454815 - 455384 | 20472.5 |
| sulfatase | RT97_02105 | Not Available | Positive | 455442 - 457193 | 64212.2 |
| alkylhydroperoxidase | RT97_02110 | Not Available | Negative | 457317 - 457895 | 21695.1 |
| lysr family transcriptional regulator | RT97_02115 | Not Available | Negative | 457960 - 458886 | 33464.5 |
| multidrug abc transporter | RT97_02120 | Not Available | Positive | 459027 - 460469 | 49427.6 |
| hypothetical protein | RT97_02125 | Not Available | Positive | 460886 - 461224 | 12408.6 |
| nmra family transcriptional regulator | RT97_02130 | Not Available | Negative | 461329 - 462198 | 30809.4 |
| alcohol dehydrogenase | RT97_02135 | Not Available | Negative | 462246 - 463181 | 32396.9 |
| lysr family transcriptional regulator | RT97_02140 | Not Available | Positive | 463285 - 464160 | 31247.9 |
| hypothetical protein | RT97_02145 | Not Available | Negative | 464214 - 465839 | 59457.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
