Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilw | RT97_21555 | Not Available | Positive | 4630459 - 4631313 | 31575.3 |
| hypothetical protein | RT97_21560 | Not Available | Positive | 4631306 - 4632268 | 32372.7 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | RT97_21565 | Not Available | Positive | 4632265 - 4633551 | 46181.5 |
| histidyl-trna synthase | RT97_21570 | Not Available | Positive | 4633567 - 4634877 | 48041.6 |
| membrane protein | RT97_21575 | Not Available | Positive | 4634884 - 4635576 | 25496.2 |
| membrane protein | RT97_21580 | Not Available | Positive | 4635584 - 4636726 | 39445.9 |
| gtp-binding protein der | RT97_21585 | Not Available | Positive | 4636787 - 4638130 | 49387.2 |
| rna-binding protein hfq | RT97_21590 | Not Available | Positive | 4638296 - 4638541 | 9016.84 |
| gtp-binding protein hflx | RT97_21595 | Not Available | Positive | 4638608 - 4639768 | 42844.2 |
| membrane protein | RT97_21600 | Not Available | Positive | 4639843 - 4641219 | 49206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
