Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | RT97_21455 | Not Available | Negative | 4606835 - 4607521 | 24805.6 |
| 4-hydroxyphenylacetate 3-hydroxylase | RT97_21460 | Not Available | Negative | 4607616 - 4609253 | 59493.5 |
| tetr family transcriptional regulator | RT97_21465 | Not Available | Positive | 4609366 - 4610070 | 25542.4 |
| isochorismatase | RT97_21470 | Not Available | Positive | 4610083 - 4610685 | 21966.4 |
| propionyl-coa synthetase | RT97_21475 | Not Available | Positive | 4610821 - 4612734 | 69550.6 |
| 2-oxoglutarate dehydrogenase | RT97_21480 | Not Available | Positive | 4612914 - 4615790 | 106163.0 |
| dihydrolipoamide succinyltransferase | RT97_21485 | Not Available | Positive | 4615845 - 4617113 | 43802.9 |
| hypothetical protein | RT97_21490 | Not Available | Positive | 4617130 - 4617591 | 16749.1 |
| dihydrolipoamide dehydrogenase | RT97_21495 | Not Available | Positive | 4617607 - 4619034 | 49950.1 |
| atpase | RT97_21500 | Not Available | Positive | 4619048 - 4620148 | 42280.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
