Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | RT97_21405 | Not Available | Negative | 4597028 - 4597201 | 6547.1 |
| 50s ribosomal protein l28 | RT97_21410 | Not Available | Negative | 4597213 - 4597446 | 8779.65 |
| thioredoxin reductase | RT97_21415 | Not Available | Negative | 4597630 - 4598589 | 34444.2 |
| catabolite gene activator protein | RT97_21420 | Not Available | Positive | 4598771 - 4599445 | 24972.5 |
| cell division protein ftsk | RT97_21425 | Not Available | Positive | 4599539 - 4601959 | 87704.5 |
| membrane protein | RT97_21430 | Not Available | Positive | 4602128 - 4602760 | 22716.1 |
| recombination factor protein rara | RT97_21435 | Not Available | Positive | 4602831 - 4603185 | 12811.3 |
| dihydrolipoamide dehydrogenase | RT97_21440 | Not Available | Positive | 4603186 - 4604776 | 54915.5 |
| hydrolase nlp/p60 | RT97_21445 | Not Available | Negative | 4604865 - 4605449 | 21242.3 |
| hypothetical protein | RT97_21450 | Not Available | Positive | 4605691 - 4606821 | 40558.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
