Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | RT97_21355 | Not Available | Negative | 4586306 - 4587094 | 27800.6 |
| twin-arginine translocation pathway signal | RT97_21360 | Not Available | Negative | 4587106 - 4588458 | 47694.9 |
| acyl-coa dehydrogenase | RT97_21365 | Not Available | Negative | 4588541 - 4589656 | 40056.7 |
| acyl-coa dehydrogenase | RT97_21370 | Not Available | Negative | 4589695 - 4590876 | 43895.5 |
| phosphoribosylglycinamide formyltransferase | RT97_21375 | Not Available | Positive | 4591104 - 4591706 | 21264.8 |
| peptidase inhibitor i78 | RT97_21380 | Not Available | Positive | 4591736 - 4592056 | 10778.0 |
| hypothetical protein | RT97_21385 | Not Available | Negative | 4592068 - 4592310 | 9187.08 |
| peptidase m48 | RT97_21390 | Not Available | Positive | 4592362 - 4594215 | 70142.6 |
| sam-dependent methyltransferase | RT97_21395 | Not Available | Positive | 4594244 - 4595515 | 46760.1 |
| aminotransferase | RT97_21400 | Not Available | Positive | 4595648 - 4596862 | 46135.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
