Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphatase | RT97_21305 | Not Available | Negative | 4575265 - 4576122 | 30824.8 |
| polyamine abc transporter atpase | RT97_21310 | Not Available | Negative | 4576119 - 4577180 | 38441.5 |
| abc transporter permease | RT97_21315 | Not Available | Negative | 4577170 - 4577970 | 28964.3 |
| abc transporter permease | RT97_21320 | Not Available | Negative | 4577984 - 4578805 | 29434.5 |
| abc transporter substrate-binding protein | RT97_21325 | Not Available | Negative | 4578818 - 4579831 | 36607.1 |
| laci family transcriptional regulator | RT97_21330 | Not Available | Negative | 4579870 - 4580880 | 35328.5 |
| peptidase a8 | RT97_21335 | Not Available | Negative | 4581040 - 4581558 | 18906.1 |
| isoleucine--trna ligase | RT97_21340 | Not Available | Negative | 4581558 - 4584407 | 106133.0 |
| riboflavin kinase | RT97_21345 | Not Available | Negative | 4584531 - 4585568 | 37350.8 |
| restriction endonuclease | RT97_21350 | Not Available | Positive | 4585736 - 4586296 | 21035.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
