Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | RT97_21240 | Not Available | Positive | 4556945 - 4557871 | 32868.2 |
| hypothetical protein | RT97_21245 | Not Available | Negative | 4557841 - 4558413 | 21951.0 |
| hypothetical protein | RT97_21255 | Not Available | Negative | 4559057 - 4559551 | 17861.8 |
| hypothetical protein | RT97_21265 | Not Available | Negative | 4564942 - 4566072 | 36364.4 |
| peptidase | RT97_21270 | Not Available | Negative | 4566073 - 4566522 | 16550.8 |
| dna mismatch repair protein muts | RT97_21275 | Not Available | Negative | 4566551 - 4569208 | 95923.0 |
| hypothetical protein | RT97_21280 | Not Available | Positive | 4569305 - 4569928 | 21800.0 |
| magnesium transporter | RT97_21285 | Not Available | Positive | 4569971 - 4570948 | 36411.8 |
| hypothetical protein | RT97_21290 | Not Available | Positive | 4571002 - 4571469 | 17114.7 |
| membrane protein | RT97_21300 | Not Available | Negative | 4573542 - 4575200 | 59717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
