Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkanesulfonate monooxygenase | RT97_21140 | Not Available | Negative | 4532851 - 4533960 | 40855.9 |
| sulfonate abc transporter substrate-binding protein | RT97_21145 | Not Available | Negative | 4533998 - 4535008 | 36372.0 |
| acyl-coa dehydrogenase | RT97_21150 | Not Available | Positive | 4535165 - 4536400 | 43497.6 |
| nitrate abc transporter substrate-binding protein | RT97_21155 | Not Available | Positive | 4536397 - 4537377 | 34564.3 |
| cysteine dioxygenase | RT97_21160 | Not Available | Positive | 4537359 - 4537973 | 22440.2 |
| sulfurtransferase | RT97_21165 | Not Available | Positive | 4537970 - 4539592 | 58020.8 |
| atp-dependent rna helicase | RT97_21170 | Not Available | Negative | 4539662 - 4541131 | 53500.9 |
| metalloprotease | RT97_21175 | Not Available | Negative | 4541263 - 4542144 | 31118.4 |
| deoxycytidine triphosphate deaminase | RT97_21180 | Not Available | Negative | 4542253 - 4542819 | 21225.2 |
| guanine deaminase | RT97_21185 | Not Available | Negative | 4542989 - 4544275 | 46982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
