Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RT97_21085 | Not Available | Positive | 4521648 - 4522619 | 34952.3 |
| acetyltransferase | RT97_21090 | Not Available | Negative | 4522641 - 4523360 | 27185.2 |
| dna-binding protein | RT97_21095 | Not Available | Positive | 4523516 - 4524997 | 53514.5 |
| arac family transcriptional regulator | RT97_21105 | Not Available | Positive | 4525633 - 4526724 | 39794.7 |
| sulfonate abc transporter substrate-binding protein | RT97_21110 | Not Available | Negative | 4526721 - 4527692 | 33895.7 |
| cytochrome c | RT97_21115 | Not Available | Negative | 4527727 - 4528887 | 41057.5 |
| abc transporter | RT97_21120 | Not Available | Negative | 4528889 - 4529683 | 28695.8 |
| sulfonate abc transporter permease | RT97_21125 | Not Available | Negative | 4529677 - 4530759 | 38525.4 |
| abc transporter substrate-binding protein | RT97_21130 | Not Available | Negative | 4530756 - 4531757 | 35765.9 |
| hypothetical protein | RT97_21135 | Not Available | Negative | 4531873 - 4532697 | 30034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
