Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | RT97_00150 | Not Available | Positive | 29745 - 31028 | 46069.6 |
| molybdenum cofactor biosynthesis protein moea | RT97_00155 | Not Available | Positive | 31100 - 32269 | 42164.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein a | RT97_00160 | Not Available | Positive | 32284 - 32922 | 22296.7 |
| molybdenum cofactor biosynthesis protein moaa | RT97_00165 | Not Available | Positive | 32946 - 34262 | 45837.5 |
| transcriptional regulator | RT97_00170 | Not Available | Negative | 34275 - 35231 | 34276.3 |
| oxidoreductase | RT97_00175 | Not Available | Positive | 35303 - 36376 | 38442.3 |
| ribonuclease h | RT97_00180 | Not Available | Negative | 36390 - 36839 | 16496.9 |
| methyltransferase type 11 | RT97_00185 | Not Available | Negative | 36879 - 37631 | 28581.5 |
| hydroxyacylglutathione hydrolase | RT97_00190 | Not Available | Positive | 37651 - 38430 | 27747.0 |
| lytic transglycosylase | RT97_00195 | Not Available | Positive | 38427 - 40049 | 58613.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
