Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | RT97_21035 | Not Available | Negative | 4511845 - 4512339 | 17559.1 |
| ester cyclase | RT97_21040 | Not Available | Negative | 4512388 - 4512843 | 16731.0 |
| hypothetical protein | RT97_21045 | Not Available | Positive | 4512987 - 4513913 | 33496.6 |
| hypothetical protein | RT97_21050 | Not Available | Negative | 4513942 - 4514367 | 15026.9 |
| adenylosuccinate synthase | RT97_21055 | Not Available | Negative | 4514364 - 4515710 | 47449.1 |
| hypothetical protein | RT97_21060 | Not Available | Negative | 4515733 - 4516701 | 35084.9 |
| serine/threonine protein kinase | RT97_21065 | Not Available | Negative | 4516727 - 4517713 | 35085.9 |
| membrane protein | RT97_21070 | Not Available | Negative | 4517730 - 4519040 | 46991.1 |
| biotin transporter bioy | RT97_21075 | Not Available | Positive | 4519064 - 4519915 | 30164.3 |
| acetylornithine deacetylase | RT97_21080 | Not Available | Negative | 4519932 - 4521449 | 54877.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
