Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | RT97_20985 | Not Available | Negative | 4505477 - 4507030 | 55740.6 |
| hypothetical protein | RT97_20990 | Not Available | Negative | 4507155 - 4507514 | 13125.1 |
| nuclease | RT97_20995 | Not Available | Negative | 4507697 - 4507957 | 9647.83 |
| xre family transcriptional regulator | RT97_21000 | Not Available | Positive | 4508022 - 4508291 | 9145.0 |
| hypothetical protein | RT97_21005 | Not Available | Positive | 4508389 - 4508655 | 9673.58 |
| hypothetical protein | RT97_21010 | Not Available | Negative | 4508676 - 4509713 | 37128.4 |
| hypothetical protein | RT97_21015 | Not Available | Negative | 4509758 - 4510267 | 19280.8 |
| hypothetical protein | RT97_21020 | Not Available | Positive | 4510378 - 4510761 | 13383.3 |
| polyketide cyclase | RT97_21025 | Not Available | Positive | 4510923 - 4511381 | 16631.5 |
| aldehyde-activating protein | RT97_21030 | Not Available | Positive | 4511410 - 4511823 | 15045.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
