Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde-activating protein | RT97_20835 | Not Available | Positive | 4480068 - 4480541 | 17531.1 |
| lysr family transcriptional regulator | RT97_20840 | Not Available | Negative | 4480555 - 4481457 | 32842.7 |
| acyl-coa dehydrogenase | RT97_20845 | Not Available | Positive | 4481643 - 4482842 | 43270.1 |
| coa-transferase | RT97_20850 | Not Available | Positive | 4482849 - 4484084 | 43595.0 |
| lactoylglutathione lyase | RT97_20855 | Not Available | Positive | 4484101 - 4484532 | 15274.4 |
| helicase snf2 | RT97_20860 | Not Available | Positive | 4484784 - 4485164 | 12438.6 |
| membrane protein | RT97_20865 | Not Available | Negative | 4485439 - 4485897 | 16374.8 |
| 2-methylisocitrate lyase | RT97_20870 | Not Available | Positive | 4485995 - 4486825 | 28723.9 |
| uracil-dna glycosylase | RT97_20875 | Not Available | Positive | 4486842 - 4487429 | 21775.4 |
| hypothetical protein | RT97_20880 | Not Available | Negative | 4487465 - 4489144 | 61529.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
