Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoyl-coa oxygenase | RT97_20735 | Not Available | Positive | 4461383 - 4462810 | 53882.7 |
| benzoyl-coa oxygenase | RT97_20740 | Not Available | Positive | 4462936 - 4464225 | 46416.1 |
| acyl dehydratase | RT97_20745 | Not Available | Positive | 4464236 - 4464676 | 16351.5 |
| adhesin | RT97_20750 | Not Available | Negative | 4464737 - 4465237 | 14251.7 |
| rrf2 family transcriptional regulator | RT97_20755 | Not Available | Positive | 4465505 - 4465966 | 16247.7 |
| thioredoxin reductase | RT97_20760 | Not Available | Positive | 4465956 - 4466861 | 31392.8 |
| Trna-gly | Not Available | Not Available | Positive | 4466927 - 4467002 | Not Available |
| fumarylacetoacetase | RT97_20770 | Not Available | Negative | 4467056 - 4468378 | 47678.4 |
| cyclase | RT97_20775 | Not Available | Negative | 4468398 - 4469204 | 29917.5 |
| abc transporter permease | RT97_20780 | Not Available | Negative | 4469252 - 4470043 | 27714.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
