Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | RT97_20685 | Not Available | Negative | 4449762 - 4450508 | 26464.7 |
| abc transporter permease | RT97_20690 | Not Available | Negative | 4450651 - 4451601 | 33366.2 |
| abc transporter permease | RT97_20695 | Not Available | Negative | 4451598 - 4452470 | 31429.7 |
| abc transporter permease | RT97_20700 | Not Available | Negative | 4452655 - 4453830 | 41278.4 |
| alpha/beta hydrolase | RT97_20705 | Not Available | Negative | 4453827 - 4454636 | 29923.5 |
| 4-hydroxybenzoate--coa ligase | RT97_20710 | Not Available | Negative | 4454785 - 4456332 | 56403.1 |
| aldehyde dehydrogenase | RT97_20715 | Not Available | Negative | 4456368 - 4457918 | 53412.0 |
| 2-hydroxylaminobenzoate mutase | RT97_20720 | Not Available | Negative | 4457915 - 4458385 | 16943.1 |
| transcriptional regulator | RT97_20725 | Not Available | Positive | 4458599 - 4459537 | 33559.0 |
| benzoyl-coa-dihydrodiol lyase | RT97_20730 | Not Available | Positive | 4459665 - 4461350 | 60749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
