Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_01995 | Not Available | Positive | 434303 - 434515 | 7397.79 |
| 2-nitropropane dioxygenase | RT97_02000 | Not Available | Positive | 434631 - 435683 | 36201.6 |
| phospholipase | RT97_02005 | Not Available | Positive | 435693 - 436361 | 24167.3 |
| hypothetical protein | RT97_02010 | Not Available | Positive | 436489 - 437403 | 33057.3 |
| hypothetical protein | RT97_02015 | Not Available | Positive | 437514 - 437762 | 9228.97 |
| glycine dehydrogenase | RT97_02020 | Not Available | Negative | 437790 - 440705 | 104341.0 |
| glycine cleavage system protein h | RT97_02025 | Not Available | Negative | 440835 - 441206 | 12959.1 |
| glycine cleavage system protein t | RT97_02030 | Not Available | Negative | 441260 - 442441 | 41348.0 |
| hypothetical protein | RT97_02035 | Not Available | Negative | 442738 - 443313 | 21251.6 |
| c4-dicarboxylate abc transporter | RT97_02045 | Not Available | Negative | 444018 - 445310 | 45916.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
