Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | RT97_20535 | Not Available | Positive | 4418292 - 4418894 | 22041.5 |
| lysophospholipase | RT97_20540 | Not Available | Positive | 4419107 - 4420015 | 32785.2 |
| fatty acid desaturase | RT97_20545 | Not Available | Negative | 4420030 - 4420980 | 36769.3 |
| rhodanese domain-containing protein | RT97_20550 | Not Available | Positive | 4421292 - 4422941 | 59432.5 |
| cell division topological specificity factor mine | RT97_20555 | Not Available | Negative | 4422904 - 4423176 | 10195.4 |
| cell division inhibitor mind | RT97_20560 | Not Available | Negative | 4423179 - 4423994 | 29346.4 |
| septum site-determining protein minc | RT97_20565 | Not Available | Negative | 4424047 - 4424814 | 26556.8 |
| uracil transporter | RT97_20570 | Not Available | Negative | 4425028 - 4426311 | 43770.9 |
| esterase | RT97_20575 | Not Available | Negative | 4426569 - 4426991 | 15362.4 |
| hypothetical protein | RT97_20580 | Not Available | Positive | 4427085 - 4428416 | 47689.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
