Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | RT97_20430 | Not Available | Positive | 4400672 - 4401586 | 32331.2 |
| alpha/beta hydrolase | RT97_20435 | Not Available | Positive | 4401629 - 4402174 | 20040.7 |
| chromosome partitioning protein parb | RT97_20440 | Not Available | Positive | 4402174 - 4403115 | 33686.7 |
| peptidoglycan-binding protein | RT97_20445 | Not Available | Positive | 4403228 - 4404121 | 30071.9 |
| 2-hydroxy-acid oxidase | RT97_20450 | Not Available | Negative | 4404210 - 4405634 | 50542.6 |
| damage-inducible protein dinb | RT97_20455 | Not Available | Positive | 4405709 - 4406209 | 18422.9 |
| atp--cobalamin adenosyltransferase | RT97_20460 | Not Available | Positive | 4406232 - 4406828 | 21433.6 |
| hypothetical protein | RT97_20465 | Not Available | Positive | 4406825 - 4407175 | 11854.1 |
| adenylate cyclase | RT97_20470 | Not Available | Positive | 4407469 - 4407987 | 18858.6 |
| gdsl family lipase | RT97_20475 | Not Available | Negative | 4407991 - 4408629 | 21865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
