Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atpase | RT97_20330 | Not Available | Positive | 4380785 - 4383019 | 76895.9 |
| gnat family acetyltransferase | RT97_20335 | Not Available | Negative | 4383026 - 4383508 | 18212.0 |
| fatty acid hydroxylase | RT97_20340 | Not Available | Negative | 4383557 - 4384684 | 42250.1 |
| beta-ketoacyl synthase | RT97_20345 | Not Available | Negative | 4384708 - 4385919 | 40768.4 |
| phosphopantetheine-binding protein | RT97_20350 | Not Available | Negative | 4385994 - 4386275 | 10046.9 |
| esterase | RT97_20355 | Not Available | Negative | 4386313 - 4387173 | 32096.6 |
| transcriptional regulator | RT97_20360 | Not Available | Positive | 4387312 - 4388001 | 25009.2 |
| histidine kinase | RT97_20365 | Not Available | Positive | 4387998 - 4389377 | 49829.2 |
| glyoxalase | RT97_20370 | Not Available | Negative | 4389374 - 4390135 | 28616.1 |
| gcn5 family acetyltransferase | RT97_20375 | Not Available | Negative | 4390141 - 4390608 | 17502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
