Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_20180 | Not Available | Negative | 4348367 - 4348768 | 14280.1 |
| hypothetical protein | RT97_20185 | Not Available | Negative | 4348762 - 4349049 | 10681.7 |
| histidine kinase | RT97_20190 | Not Available | Positive | 4349226 - 4350641 | 52364.8 |
| luxr family transcriptional regulator | RT97_20195 | Not Available | Negative | 4350781 - 4351380 | 21756.3 |
| tryptophan--trna ligase | RT97_20200 | Not Available | Negative | 4351456 - 4352787 | 48286.6 |
| peptidase m50 | RT97_20205 | Not Available | Negative | 4352801 - 4353472 | 24379.8 |
| translation factor sua5 | RT97_20210 | Not Available | Negative | 4353520 - 4354155 | 23218.0 |
| membrane protein | RT97_20215 | Not Available | Negative | 4354171 - 4355148 | 34985.5 |
| phosphoesterase | RT97_20220 | Not Available | Negative | 4355145 - 4356002 | 30952.3 |
| magnesium transporter cora | RT97_20225 | Not Available | Negative | 4356101 - 4357147 | 38515.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
