Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | RT97_01930 | Not Available | Negative | 418398 - 419105 | 24891.1 |
| atpase aaa | RT97_01935 | Not Available | Negative | 419102 - 420763 | 61156.4 |
| methyltransferase | RT97_01940 | Not Available | Negative | 420879 - 421562 | 24295.1 |
| transcriptional regulator | RT97_01945 | Not Available | Negative | 421590 - 422270 | 24844.2 |
| tetr family transcriptional regulator | RT97_01950 | Not Available | Negative | 422298 - 422855 | 20392.4 |
| hypothetical protein | RT97_01955 | Not Available | Negative | 422860 - 423495 | 23084.1 |
| lysr family transcriptional regulator | RT97_01960 | Not Available | Positive | 423707 - 424615 | 33422.4 |
| endoribonuclease l-psp | RT97_01965 | Not Available | Negative | 424605 - 425006 | 15079.8 |
| hypothetical protein | RT97_01980 | Not Available | Negative | 425933 - 429139 | 104752.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | RT97_01990 | Not Available | Positive | 432744 - 434045 | 47368.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
