Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | RT97_20025 | Not Available | Negative | 4320952 - 4321845 | 33081.8 |
| 3-ketoacyl-acp reductase | RT97_20030 | Not Available | Positive | 4321970 - 4322725 | 26018.0 |
| oxidoreductase | RT97_20035 | Not Available | Positive | 4322776 - 4323672 | 31656.9 |
| slyx | RT97_20040 | Not Available | Positive | 4323719 - 4323943 | 8611.01 |
| hemolysin d | RT97_20045 | Not Available | Negative | 4324049 - 4324732 | 24476.2 |
| chemotaxis protein chey | RT97_20050 | Not Available | Negative | 4324812 - 4325372 | 20493.6 |
| histidine kinase | RT97_20055 | Not Available | Negative | 4325369 - 4326760 | 50228.1 |
| hypothetical protein | RT97_20060 | Not Available | Negative | 4326744 - 4327538 | 28736.1 |
| cytochrome c oxidase subunit iii | RT97_20065 | Not Available | Negative | 4327644 - 4328054 | 14969.4 |
| cytochrome o ubiquinol oxidase subunit iii | RT97_20070 | Not Available | Negative | 4328051 - 4328716 | 24278.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
