Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | RT97_19965 | Not Available | Negative | 4305103 - 4306191 | 38023.6 |
| selenocysteine synthase | RT97_19970 | Not Available | Negative | 4306254 - 4307702 | 50703.0 |
| hypothetical protein | RT97_19975 | Not Available | Negative | 4307702 - 4308733 | 37633.1 |
| formate dehydrogenase | RT97_19980 | Not Available | Negative | 4308896 - 4309519 | 23941.0 |
| formate dehydrogenase | RT97_19990 | Not Available | Negative | 4310517 - 4312958 | 90796.1 |
| sulfate abc transporter substrate-binding protein | RT97_19995 | Not Available | Negative | 4313007 - 4313594 | 21309.4 |
| hypothetical protein | RT97_20000 | Not Available | Negative | 4313698 - 4314009 | 9377.81 |
| abc transporter permease | RT97_20005 | Not Available | Positive | 4314208 - 4316724 | 89134.2 |
| hypothetical protein | RT97_20010 | Not Available | Positive | 4316832 - 4318313 | 54528.5 |
| lysr family transcriptional regulator | RT97_20015 | Not Available | Negative | 4318285 - 4319181 | 32915.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
