Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | RT97_19915 | Not Available | Positive | 4294307 - 4295224 | 32173.7 |
| trna 2-selenouridine synthase | RT97_19920 | Not Available | Negative | 4295158 - 4296228 | 39576.3 |
| phosphonate abc transporter permease | RT97_19925 | Not Available | Negative | 4296267 - 4297013 | 26021.3 |
| abc transporter permease | RT97_19930 | Not Available | Negative | 4297061 - 4297897 | 29147.5 |
| phosphonate abc transporter | RT97_19935 | Not Available | Negative | 4297894 - 4298706 | 28363.5 |
| phosphonate abc transporter substrate-binding protein | RT97_19940 | Not Available | Negative | 4298849 - 4299703 | 30498.6 |
| segregation protein a | RT97_19945 | Not Available | Positive | 4299836 - 4300888 | 36134.9 |
| selenocysteine-specific elongation factor | RT97_19950 | Not Available | Negative | 4301140 - 4303035 | 67625.2 |
| hypothetical protein | RT97_19955 | Not Available | Negative | 4303049 - 4304263 | 44123.2 |
| hypothetical protein | RT97_19960 | Not Available | Negative | 4304229 - 4305089 | 31581.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
