Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RT97_19860 | Not Available | Positive | 4284510 - 4285457 | 34454.9 |
| mfs transporter | RT97_19865 | Not Available | Positive | 4285596 - 4287293 | 59833.1 |
| mode family transcriptional regulator | RT97_19870 | Not Available | Positive | 4287416 - 4287763 | 12152.9 |
| hypothetical protein | RT97_19875 | Not Available | Positive | 4287760 - 4288254 | 18017.6 |
| hypothetical protein | RT97_19885 | Not Available | Negative | 4288892 - 4289131 | 8941.49 |
| molybdate abc transporter permease | RT97_19890 | Not Available | Positive | 4289242 - 4289925 | 24062.9 |
| molybdate abc transporter substrate-binding protein | RT97_19895 | Not Available | Positive | 4289958 - 4290707 | 26228.6 |
| molybdenum abc transporter atpase | RT97_19900 | Not Available | Positive | 4290704 - 4291495 | 29118.2 |
| cbbbc protein | RT97_19905 | Not Available | Positive | 4291578 - 4293932 | 86379.5 |
| hypothetical protein | RT97_19910 | Not Available | Positive | 4293988 - 4294275 | 10019.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
