Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | RT97_19810 | Not Available | Positive | 4275822 - 4276853 | 36517.4 |
| hypothetical protein | RT97_19815 | Not Available | Positive | 4276880 - 4277587 | 25652.1 |
| hypothetical protein | RT97_19820 | Not Available | Positive | 4277641 - 4278327 | 24171.0 |
| hypothetical protein | RT97_19825 | Not Available | Positive | 4278395 - 4278619 | 7682.03 |
| hypothetical protein | RT97_19830 | Not Available | Positive | 4278616 - 4278984 | 12624.6 |
| asnc family transcriptional regulator | RT97_19835 | Not Available | Negative | 4279006 - 4279485 | 18116.0 |
| amidohydrolase | RT97_19840 | Not Available | Positive | 4279570 - 4280739 | 41430.0 |
| diaminopropionate ammonia-lyase | RT97_19845 | Not Available | Positive | 4280769 - 4281974 | 42775.0 |
| patatin | RT97_19850 | Not Available | Negative | 4281981 - 4283174 | 42408.0 |
| atp-binding protein | RT97_19855 | Not Available | Positive | 4283354 - 4284445 | 38273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
