Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor faimly transcriptional regulator | RT97_19705 | Not Available | Negative | 4255545 - 4256315 | 27973.7 |
| glycerol-3-phosphate dehydrogenase | RT97_19710 | Not Available | Positive | 4256438 - 4258105 | 61487.1 |
| abc transporter | RT97_19715 | Not Available | Positive | 4258105 - 4259175 | 37669.6 |
| abc transporter atp-binding protein | RT97_19720 | Not Available | Positive | 4259334 - 4260404 | 38870.1 |
| abc transporter permease | RT97_19725 | Not Available | Positive | 4260481 - 4261371 | 33085.0 |
| sugar abc transporter permease | RT97_19730 | Not Available | Positive | 4261444 - 4262256 | 30624.9 |
| membrane protein | RT97_19735 | Not Available | Positive | 4262269 - 4262577 | 11565.7 |
| hypothetical protein | RT97_19740 | Not Available | Positive | 4262758 - 4262965 | 7661.29 |
| 6-pyruvoyl tetrahydrobiopterin synthase | RT97_19745 | Not Available | Negative | 4263036 - 4263398 | 13904.7 |
| 7-cyano-7-deazaguanine reductase | RT97_19750 | Not Available | Negative | 4263412 - 4264050 | 23330.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
