Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | RT97_19600 | Not Available | Negative | 4226933 - 4227670 | 24662.9 |
| actin | RT97_19605 | Not Available | Negative | 4227667 - 4229193 | 54431.3 |
| iditol 2-dehydrogenase | RT97_19610 | Not Available | Negative | 4229190 - 4230326 | 40713.5 |
| dehydrogenase | RT97_19615 | Not Available | Positive | 4230480 - 4231505 | 36274.5 |
| glucose-methanol-choline oxidoreductase | RT97_19620 | Not Available | Negative | 4231405 - 4233135 | 61610.6 |
| alanine racemase | RT97_19630 | Not Available | Negative | 4233735 - 4234874 | 40715.6 |
| haloacid dehalogenase | RT97_19635 | Not Available | Negative | 4234888 - 4235550 | 23851.2 |
| lysr family transcriptional regulator | RT97_19640 | Not Available | Positive | 4235623 - 4236540 | 34028.0 |
| hypothetical protein | RT97_19645 | Not Available | Negative | 4236542 - 4236856 | 11085.4 |
| l-psp family endoribonuclease | RT97_19650 | Not Available | Negative | 4236962 - 4237420 | 15832.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
