Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_19550 | Not Available | Negative | 4213946 - 4215652 | 60028.2 |
| membrane protein | RT97_19555 | Not Available | Negative | 4215778 - 4217001 | 44752.1 |
| acetylornithine deacetylase | RT97_19560 | Not Available | Negative | 4217199 - 4218365 | 41994.0 |
| glycerophosphodiester phosphodiesterase | RT97_19565 | Not Available | Positive | 4218466 - 4219662 | 43205.6 |
| amidohydrolase | RT97_19570 | Not Available | Positive | 4219772 - 4220977 | 43060.4 |
| hypothetical protein | RT97_19575 | Not Available | Positive | 4220974 - 4222068 | 39637.6 |
| abc transporter permease | RT97_19580 | Not Available | Negative | 4222169 - 4223296 | 39907.0 |
| molybdopterin oxidoreductase | RT97_19585 | Not Available | Positive | 4223348 - 4225417 | 75057.2 |
| aminopeptidase | RT97_19590 | Not Available | Positive | 4225414 - 4226535 | 41118.4 |
| polyhydroxyalkanoic acid synthase | RT97_19595 | Not Available | Positive | 4226528 - 4226842 | 11482.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
