Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit iii | RT97_01865 | Not Available | Negative | 404519 - 405124 | 21221.4 |
| hypothetical protein | RT97_01870 | Not Available | Negative | 405288 - 406055 | 28451.9 |
| hypothetical protein | RT97_01875 | Not Available | Negative | 406163 - 406681 | 17411.7 |
| hypothetical protein | RT97_01890 | Not Available | Negative | 409821 - 410363 | 18384.7 |
| hypothetical protein | RT97_01895 | Not Available | Positive | 411184 - 412197 | 32813.2 |
| hypothetical protein | RT97_01905 | Not Available | Negative | 412781 - 414622 | 68066.3 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain protein | RT97_01910 | Not Available | Negative | 414685 - 415371 | 24469.6 |
| hypothetical protein | RT97_01915 | Not Available | Positive | 415635 - 417044 | 53180.1 |
| hypothetical protein | RT97_01920 | Not Available | Negative | 417113 - 417472 | 13424.6 |
| hypothetical protein | RT97_01925 | Not Available | Positive | 417659 - 418420 | 27731.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
