Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor sui1 | RT97_19500 | Not Available | Negative | 4203623 - 4204000 | 12855.7 |
| rna helicase | RT97_19505 | Not Available | Positive | 4204054 - 4205319 | 45240.7 |
| stress responsive protein | RT97_19510 | Not Available | Negative | 4205330 - 4205632 | 11342.4 |
| hypothetical protein | RT97_19515 | Not Available | Negative | 4205647 - 4205952 | 11005.1 |
| acyl-coa dehydrogenase | RT97_19520 | Not Available | Negative | 4206097 - 4207263 | 41788.3 |
| acyl-coa dehydrogenase | RT97_19525 | Not Available | Negative | 4207270 - 4208430 | 42762.6 |
| 2,4-dienoyl-coa reductase | RT97_19530 | Not Available | Negative | 4208446 - 4209357 | 31592.7 |
| 3-methylcrotonyl-coa carboxylase | RT97_19535 | Not Available | Negative | 4209401 - 4211353 | 68819.6 |
| acetyl-coa carboxylase | RT97_19540 | Not Available | Negative | 4211350 - 4212960 | 56925.4 |
| histidine kinase | RT97_19545 | Not Available | Negative | 4213034 - 4213813 | 26551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
