Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | RT97_19350 | Not Available | Positive | 4172955 - 4173653 | 25243.5 |
| hypothetical protein | RT97_19355 | Not Available | Negative | 4173685 - 4174179 | 17740.7 |
| hypothetical protein | RT97_19360 | Not Available | Negative | 4174426 - 4174647 | 7462.34 |
| lipoprotein | RT97_19365 | Not Available | Negative | 4174695 - 4175366 | 23552.1 |
| mammalian cell entry protein | RT97_19370 | Not Available | Negative | 4175382 - 4176338 | 33523.8 |
| iron abc transporter atp-binding protein | RT97_19375 | Not Available | Negative | 4176355 - 4177197 | 30360.9 |
| abc transporter permease | RT97_19380 | Not Available | Negative | 4177360 - 4178526 | 41706.1 |
| lysr family transcriptional regulator | RT97_19385 | Not Available | Negative | 4178661 - 4179566 | 32395.3 |
| choline dehydrogenase | RT97_19390 | Not Available | Positive | 4179713 - 4181347 | 59935.8 |
| transcriptional regulator | RT97_19395 | Not Available | Negative | 4181363 - 4182028 | 24309.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
