Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_19145 | Not Available | Positive | 4129664 - 4130047 | 14333.8 |
| abc transporter substrate-binding protein | RT97_19150 | Not Available | Positive | 4130126 - 4131244 | 39797.0 |
| abc transporter permease | RT97_19155 | Not Available | Positive | 4131274 - 4132335 | 36076.9 |
| abc transporter permease | RT97_19160 | Not Available | Positive | 4132332 - 4133255 | 31287.7 |
| formamidase | RT97_19165 | Not Available | Positive | 4133261 - 4134253 | 35892.9 |
| cysteine hydrolase | RT97_19170 | Not Available | Positive | 4134250 - 4134948 | 24914.1 |
| abc transporter atp-binding protein | RT97_19175 | Not Available | Positive | 4134958 - 4136553 | 56671.6 |
| cysteine hydrolase | RT97_19180 | Not Available | Positive | 4136544 - 4137215 | 23930.7 |
| gntr family transcriptional regulator | RT97_19185 | Not Available | Positive | 4137212 - 4137982 | 28994.7 |
| hypothetical protein | RT97_19190 | Not Available | Negative | 4138005 - 4139564 | 53330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
