Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_19095 | Not Available | Negative | 4118457 - 4119305 | 29311.7 |
| 3-oxoacyl-acp synthase | RT97_19100 | Not Available | Negative | 4119302 - 4120498 | 41397.8 |
| permease | RT97_19105 | Not Available | Negative | 4120657 - 4122261 | 56932.5 |
| peptidase m48 | RT97_19110 | Not Available | Positive | 4122366 - 4123229 | 30371.5 |
| allophanate hydrolase | RT97_19115 | Not Available | Positive | 4123451 - 4125169 | 59024.5 |
| abc transporter substrate-binding protein | RT97_19120 | Not Available | Positive | 4125191 - 4126195 | 35382.1 |
| taurine abc transporter permease | RT97_19125 | Not Available | Positive | 4126198 - 4127025 | 29441.8 |
| nitrate abc transporter atp-binding protein | RT97_19130 | Not Available | Positive | 4127149 - 4127982 | 31510.3 |
| hypothetical protein | RT97_19135 | Not Available | Positive | 4128016 - 4128213 | 6778.1 |
| amidase | RT97_19140 | Not Available | Positive | 4128210 - 4129667 | 50294.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
