Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | RT97_19045 | Not Available | Negative | 4109336 - 4110118 | 27322.2 |
| exonuclease | RT97_19050 | Not Available | Negative | 4110398 - 4110592 | 7128.34 |
| branched-chain amino acid aminotransferase | RT97_19055 | Not Available | Positive | 4110728 - 4111681 | 35194.0 |
| hypothetical protein | RT97_19060 | Not Available | Positive | 4111687 - 4111896 | 7620.11 |
| hypothetical protein | RT97_19065 | Not Available | Positive | 4111903 - 4112319 | 14480.2 |
| hypothetical protein | RT97_19070 | Not Available | Negative | 4112332 - 4113381 | 37976.4 |
| polymerase | RT97_19075 | Not Available | Negative | 4113385 - 4114635 | 45802.2 |
| histidine kinase | RT97_19080 | Not Available | Negative | 4114779 - 4115978 | 43219.0 |
| chemotaxis protein chey | RT97_19085 | Not Available | Negative | 4115994 - 4116716 | 26652.4 |
| halogenase | RT97_19090 | Not Available | Negative | 4116770 - 4118428 | 61850.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
